miR-EdiTar specifications

Information


Unique identifier OMICS_19913
Name miR-EdiTar
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainers


  • person_outline Alessandro Lagana
  • person_outline Carlo Croce

Additional information


http://microrna.osumc.edu/mireditar/home/help?page_name=Help

Publication for miR-EdiTar

miR-EdiTar citations

 (2)
library_books

Altered RNA editing in 3′ UTR perturbs microRNA mediated regulation of oncogenes and tumor suppressors

2016
Sci Rep
PMCID: 4793219
PMID: 26980570
DOI: 10.1038/srep23226

[…] A binding data of highly conserved microRNA families from http://mircode.org/info.php. We used intersectBed of BedTools to find RNA editing sites that overlap with microRNA seed regions. We then used miR-EdiTar to visualize the binding between a microRNA and its target 3′ UTR sequences. […]

library_books

RNA Editing and Drug Discovery for Cancer Therapy

2013
Sci World J
PMCID: 3655661
PMID: 23737728
DOI: 10.1155/2013/804505

[…] contains known RNA editing sites curated from the literature and GenBank. DARNED [, ] contains region-, gene-, and sequence-based inputs for RNA editing data retrieval from human and model organisms. miR-EdiTar [] contains predicted miRNA binding sites that could be modified by A-to-I-editing, as well as A-to-I editing-induced miRNA binding sites. Both ExpEdit [] and RNA-eXpress [] are the annotat […]

miR-EdiTar institution(s)
Department of Molecular Virology, Immunology and Medical Genetics, Comprehensive Cancer Center, The Ohio State University, Columbus, OH, USA; Department of Clinical and Molecular Biomedicine, University of Catania, Italy; Department of Mathematics and Computer Science, University of Catania, Italy; Department of Computer Science, Courant Institute of Mathematical Sciences, New York University, New York, NY, USA
miR-EdiTar funding source(s)
Supported by a fellowship sponsored by ‘Associazione Sclerosi Tuberosa’ (AST) and U.S. National Science Foundation grants 0922738, 0929338 and 1158273 and National Institutes of Health grants GM 32877-21/ 22 and 2R01GM032877-25A1.

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