miRdentify statistics

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Associated diseases

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miRdentify specifications


Unique identifier OMICS_05119
Name miRdentify
Software type Package/Module, Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline miRdentify Team <>

Publication for miRdentify

miRdentify in publications

PMCID: 5080802
PMID: 27782799
DOI: 10.1186/s12864-016-3168-2

[…] breed in serum., we analysed 71 small rna-seq libraries derived from nine tissues (gluteus medius, platysma, masseter muscle, heart, liver, cartilage, bone, total blood and serum) using mirdeep2 and mirdentify tools. known mirnas represented between 2.3 and 62.9 % of the reads in 71 libraries. a total of 683 novel mirnas were identified. breed and tissue type affected the number of mirnas […]

PMCID: 4306309
PMID: 25674563
DOI: 10.3389/fbioe.2015.00007

[…] and define a high-confidence set of sequences (kozomara and griffiths-jones, ). the software used in these studies has, however, not been published, so the methods are not described in detail here., mirdentify has recently been released to the public to analyze massive pooled data (hansen et al., ). it requires that both guide and passenger mirna strands are detected and evaluates 10 features […]

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miRdentify institution(s)
Department of Molecular Biology and Genetics (MBG), Aarhus University, Aarhus, Denmark; Denmark Interdisciplinary Nanoscience Center (iNANO), Aarhus University, Aarhus, Denmark

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