miRecords statistics

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miRecords specifications


Unique identifier OMICS_12447
Name miRecords
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Allowed
Maintained Yes


  • Invertebrates
    • Caenorhabditis elegans
    • Drosophila melanogaster
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio
    • Gallus gallus


  • person_outline miRecords

Publication for miRecords

miRecords citations


Exosomes from patients with septic shock convey miRNAs related to inflammation and cell cycle regulation: new signaling pathways in sepsis?

PMCID: 5852953
PMID: 29540208
DOI: 10.1186/s13054-018-2003-3

[…] ware (www.ingenuity.com; Qiagen Bioinformatics, Redwood City, CA, USA) and the MicroRNA Target Filter software tool (Qiagen Bioinformatics), which relies on three algorithms (TargetScan, TarBase, and miRecords), were used to identify putative targets of the miRNAs differentially expressed in septic exosomes versus healthy controls and in the comparison of patients with sepsis according to survival […]


Integrative analysis of microRNAs and mRNAs revealed regulation of composition and metabolism in Nelore cattle

BMC Genomics
PMCID: 5804041
PMID: 29415651
DOI: 10.1186/s12864-018-4514-3

[…] The miRNA target genes were obtained from the MicroRNA Target Filter tool of QIAGEN’s Ingenuity Pathway Analysis (IPA®, Redwood City-CA) that uses TargetScan, miRecords and TarBase as the miRNA target genes databases. The IPA® uses information from predicted targets of mammalian microRNAs, based on the fact that target sites are usually conserved because mi […]


Identification of microRNAs as potential markers of ovarian toxicity

J Appl Toxicol
PMCID: 5901046
PMID: 29377183
DOI: 10.1002/jat.3583

[…] The purpose of target prediction analysis was to reveal miRNA target genes (mRNA) that that may be dysregulated by the CS‐induced alterations in miRNA expression. The online miRNA database miRecords (http://c1.accurascience.com/miRecords) was selected as the most suitable for this study as it integrates 11 target prediction programs (DIANA‐microT, MicroInspector, miRanda, MirTarget2, mi […]


DIANA TarBase v8: a decade long collection of experimentally supported miRNA–gene interactions

Nucleic Acids Res
PMCID: 5753203
PMID: 29156006
DOI: 10.1093/nar/gkx1141

[…] miRPath v3.0 () for functional characterization of miRNAs.Additionally to the ∼1 million entries indexed in TarBase, miRNA targets retrieved from other relevant databases, including miRTarBase () and miRecords (), are also provided to users. These entries are disregarded from database statistics. […]


MicroRNA expression profiles and type 1 diabetes mellitus: systematic review and bioinformatic analysis

PMCID: 5682418
PMID: 28986402
DOI: 10.1530/EC-17-0248
call_split See protocol

[…] n miRTarBase (), and interactions predicted by two or more software with at least one supporting experiment in starBase. Moreover, we obtained the complete collection of validated targets provided by miRecords. The union of all interactions retrieved from the 3 queried sources was considered as the set of validated miRNA–target gene interactions in our study.To complement the information derived f […]


Decrease in Lymphoid Specific Helicase and 5 hydroxymethylcytosine Is Associated with Metastasis and Genome Instability

PMCID: 5667415
PMID: 29109788
DOI: 10.7150/thno.21389

[…] The putative targets of miRNAs were analyzed using the following two databases: miRecords (http://mirecords.biolead.org/) and TargetScan (http://genes.mit.edu/targetscan). The selected miRs were further confirmed using the UCSC genome browser (hg19 assembly) (http://genome.ucsc.e […]


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miRecords institution(s)
Department of Neuroscience, University of Minnesota, Minneapolis, MN, USA; Department of Biology and Biochemistry, University of Houston, Houston, TX, USA
miRecords funding source(s)
National Institutes of Health (1R21CA126209); Minnesota Medical Foundation; NIH/GM/AI (R43 GM076941); R. A. Welch Foundation (E1270)

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