miRFam statistics

info info

Citations per year

info

Popular tool citations

chevron_left miRNA target prediction chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

miRFam specifications

Information


Unique identifier OMICS_08005
Name miRFam
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Windows
Programming languages C++
Computer skills Advanced
Version 1.0
Stability Stable
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for miRFam

miRFam citation

library_books

Comprehensive analysis of small RNA seq data reveals that combination of miRNA with its isomiRs increase the accuracy of target prediction in Arabidopsis thaliana

2015
RNA Biol
PMCID: 4615835
PMID: 25629686
DOI: 10.1080/15476286.2014.996474

[…] (release november 2011), arabidopsis possesses 291 mirna precursors that generate 328 mature sequences. among them, 200 were placed into 97 different families based upon their sequence similarity (mirfam.dat of mirbase). to achieve more accurate sequence analysis, a clean and non-redundant dataset was prepared according to 2 criteria: (a) taking one precursor from each family, and (b) taking […]


Want to access the full list of citations?
miRFam institution(s)
School of Computer Science, Fudan University, Shanghai, China

miRFam reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review miRFam