miRMaster specifications

Information


Unique identifier OMICS_21519
Name miRMaster
Software type Application/Script
Interface Web user interface
Restrictions to use None
Input format FASTQ
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Tobias Fehlmann <>

Additional information


https://ccb-compute.cs.uni-saarland.de/mirmaster/tutorial/

Publication for miRMaster

miRMaster in publications

 (2)
PMCID: 5354793
PMID: 28030833
DOI: 10.18632/oncotarget.14054

[…] and even provides first insights in other rna types., we developed a tool for the comprehensive analysis of small non-coding rnas, primary mirnas, starting from ngs raw data. our web-based program mirmaster is free for academic users: www.ccb.uni-saarland.de/ mirmaster. beyond the core functionality of analyzing known mirnas, predicting isomirs, discovery of mutations in mirnas and identifying […]

PMCID: 5117531
PMID: 27895807
DOI: 10.1186/s13148-016-0287-1

[…] sequencing on standardized brain and heart samples, then compared the performance to agilent’s microarray technique and finally evaluated blood samples. using the web-based mirna analysis pipeline mirmaster and the tool novomirank [], we finally predicted 135 new high-likely mirna candidates specific for tissue and 35 new mirna candidates specific for blood samples., in this study, we examined […]


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miRMaster institution(s)
Chair for Clinical Bioinformatics, Saarland University, Saarbrucken, Germany; Hummingbird Diagnostics GmbH, Heidelberg, Germany; Department of Internal Medicine III, University Hospital Heidelberg, Heidelberg, Germany; German Center for Cardiovascular Research (DZHK), Heidelberg, Germany; Klaus Tschira Institute for Integrative Computational Cardiology, Heidelberg, Germany; Department of Human Genetics, Saarland University, Homburg, Germany; Ares Genetics GmbH, Vienna, Austria; Siemens Healthcare GmbH, Strategy and Innovation, Erlangen, Germany; Institute of Clinical Molecular Biology, Christian-Albrechts-University of Kiel, Kiel, Germany
miRMaster funding source(s)
Supported by Best Ageing [306031] European Commission (in part); Saarland University; Siemens.

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