MiRmat statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

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MiRmat specifications

Information


Unique identifier OMICS_11464
Name MiRmat
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Chenfeng He <>

Information


Unique identifier OMICS_11464
Name MiRmat
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Requirements
Perl, RNAfold, MATLAB, spider, weka
Maintained Yes

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Maintainer


  • person_outline Chenfeng He <>

Publication for MiRmat

MiRmat in publication

PMCID: 4867574
PMID: 27181057
DOI: 10.1038/srep25941

[…] mirna identification problem should be also considered as imbalance class distribution. several computational methods which have been developed for mature mirnas classification include maturebyes, mirmat, mirrim2, mirdup, maturepred, mirpara, mirexplorer, matpred and mirduplexsvm. these methods mainly focus on the use of machine learning techniques, and their lower predictive performance […]


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MiRmat institution(s)
The State Key Laboratory of Pharmaceutical Biotechnology and Jiangsu Engineering Research Center for MicroRNA Biology and Biotechnology, School of Life Science, Nanjing University, Nanjing, China; National Key Laboratory for Novel Software Technology, Nanjing University, Nanjing, China; Institute of Machine Vision and Machine Intelligence, Beijing Jingwei Textile Machinery New Technology Co., Ltd., Beijing, China; Biophysics Institute, School of Physics, Nanjing University, Nanjing, China; Ministry of Education Key Lab of Bioinformatics & System Biology, School of Life Science, Tsinghua University, Beijing, China
MiRmat funding source(s)
This work was supported by grants from the National Natural Science Foundation of China (30890044, 31071232, 61021062, 61173068), the National Basic Research Program (2007CB814806, 2010CB327903) and the Postdoctoral Science Foundation of China (20090461086).

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