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An online tool for the detection of miRNA polymorphisms in vertebrates. miRNA SNiPer accepts a list of miRNA genes and returns a table of variations within different regions of miRNA genes: pre-miRNA, mature, seed region.

Interface:
Web user interface
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable
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Institution(s)

Department of Animal Science, Biotechnical Faculty, University of Ljubljana, Domzale, Slovenia; Centre for Mathematical and Computational Biology, Rothamsted Research, Harpenden, United Kingdom; Department of Experimental Therapeutics and The Center for RNA Interference and Non-Coding RNAs, The University of Texas, M.D. Anderson Cancer Center, Houston, Texas, United States of America; National Institute of Chemistry, Ljubljana, Slovenia; Department of Animal Sciences, Washington State University, Pullman, Washington, United States of America

  • (Zorc et al., 2015) Genetic Variability of MicroRNA Genes in 15 Animal Species. Journal of genomics.
    PMID: 25874014
  • (Zorc et al., 2012) Catalog of microRNA seed polymorphisms in vertebrates. PloS one.
    PMID: 22303453
  • Animals
  • (Akhtar et al., 2016) Bioinformatic tools for microRNA dissection. Nucleic acids research.
    PMID: 26578605

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