miRNAss specifications


Unique identifier OMICS_21763
Name miRNAss
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Apache License version 2.0
Computer skills Advanced
Version 1.4
Stability Stable
stats, Matrix, Rcpp, RSpectra, CORElearn
Source code URL https://cran.r-project.org/src/contrib/miRNAss_1.4.tar.gz
Maintained Yes




No version available



Publication for miRNAss

miRNAss citations


Tensor decomposition based unsupervised feature extraction applied to matrix products for multi view data processing

PLoS One
PMCID: 5571984
PMID: 28841719
DOI: 10.1371/journal.pone.0183933

[…] fication of biologically reliable mRNAs. However, it cannot identify latent correlation between miRNAs and mRNAs, as hierarchical clustering of PC loading attributed to samples identified no pairs of miRNAss and mRNA (), which were identified when TD applied to type II tensors was considered and without which no integrated analysis of multi-omics datasets by PCA based unsupervised FE were successf […]


Dissecting microRNA mediated regulation of stemness, reprogramming, and pluripotency

Cell Regen
PMCID: 4802578
PMID: 27006752
DOI: 10.1186/s13619-016-0028-0

[…] MiRNAss regulate gene expression at the post-transcriptional level by binding to the 3′-untranslated regions (3′ UTRs) or the open reading frames of target genes, resulting in the degradation of targe […]

miRNAss institution(s)
Research Institute for Signals, Systems and Computational Intelligence, sinc(i), FICH-UNL, CONICET, Santa Fe, Argentina
miRNAss funding source(s)
Supported by Consejo Nacional de Investigaciones Científicas y Técnicas [PIP 2013 117]; Universidad Nacional del Litoral [CAI+D 2011 548, 2016 082]; and Agencia Nacional de Promoción Científica y Tecnológica [PICT 2014 2627], Argentina.

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