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miRonTop specifications


Unique identifier OMICS_14645
Name miRonTop
Interface Web user interface
Restrictions to use None
Input data Results of a global mRNA expression data
Input format TXT
Programming languages Java
Computer skills Basic
Stability Stable
Maintained Yes


Publication for miRonTop

miRonTop citations


“Seed Milarity” Confers to hsa miR 210 and hsa miR 147b Similar Functional Activity

PLoS One
PMCID: 3441733
PMID: 23028679
DOI: 10.1371/journal.pone.0044919

[…] is mandatory to establish a minimal set of mRNA modulated by a given miRNA and offer the opportunity to identify miRNAs with overlapping regulatory functions. Using our recently described application MiRonTop and a large set of miRNA-overexpressed microarray experiments, we noticed indeed a close relationship between two miRNAs from distinct families, hsa-miR-147b and hsa-miR-210. While these 2 s […]


Deregulated MicroRNAs in Myotonic Dystrophy Type 2

PLoS One
PMCID: 3387258
PMID: 22768114
DOI: 10.1371/journal.pone.0039732

[…] /mRNAs couples displaying a statistically significant reciprocal correlation of their expression levels were included; 3) among the genes passing filters 1 and 2, predicted targets were identified by MiRonTop . After this highly selective selection, 1,093 miRNA/mRNA interactions were identified. Several mRNAs were targeted by more than one miRNA, leading to a potential reinforcement of the final d […]


Identification of microRNA precursors based on random forest with network level representation method of stem loop structure

BMC Bioinformatics
PMCID: 3118167
PMID: 21575268
DOI: 10.1186/1471-2105-12-165

[…] unction, the identification of miRNA targets using computational methods has developed in an increasing number. Recent improvements in this field have been reported in Li J et al [], Target-align [], MiRonTop [], etc.Recent studies showed various ways to represent RNA structure with graphs (Figure ), such as bracketed, tree, dual graph, etc. These representations specify the connectivity between R […]


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miRonTop institution(s)
Centre National de la Recherche Scientifique, Institut de Pharmacologie Moléculaire et Cellulaire, UMR6097, Sophia-Antipolis, France; University of Nice Sophia Antipolis, Nice, France
miRonTop funding source(s)
Supported by MICROENVIMET, FP7-HEALTH-F2-2008-201279, ARC, INCa and Vaincre la Mucoviscidose.

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