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miRonTop

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Integrates DNA microarrays or high-throughput sequencing data to identify the potential implication of miRNAs on a specific biological system. miRonTop allows a rapid characterization of the most pertinent mRNA targets according to several existing miRNA target prediction approaches. The flexibility of the interface allows a fine-tuning of the ‘Down’ and ‘Up’ gene sets according to three parameters that correspond to the level of expression, the extent of differential expression and a significance index.

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miRonTop classification

miRonTop specifications

Interface:
Web user interface
Input data:
Results of a global mRNA expression data
Programming languages:
Java
Stability:
Stable
Restrictions to use:
None
Input format:
TXT
Computer skills:
Basic
Maintained:
Yes

miRonTop support

Maintainer

  • Pascal Barbry <>

Credits

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Publications

Institution(s)

Centre National de la Recherche Scientifique, Institut de Pharmacologie Moléculaire et Cellulaire, UMR6097, Sophia-Antipolis, France; University of Nice Sophia Antipolis, Nice, France

Funding source(s)

Supported by MICROENVIMET, FP7-HEALTH-F2-2008-201279, ARC, INCa and Vaincre la Mucoviscidose.

Link to literature

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