Provides predictions that reflect the in vivo combinatorial nature of miRNAs from a large collection of differentially expressed transcripts and miRNAs. The miRror-Suite platform includes the miRror2.0 and Probability Supported Iterative miRror (PSI-miRror) tools. Researchers who performed large-scale transcriptomics or miRNA profiling experiments from cells and tissues will benefit from miRror-Suite. miRror-Suite provides a concise, plausible explanation for the regulation of miRNAs in such complex settings.