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Protocols

miRSel specifications

Information


Unique identifier OMICS_02819
Name miRSel
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Ralf Zimmer

Publication for miRSel

miRSel citations

 (3)
library_books

miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases

2016
J Biomed Semantics
PMCID: 4877743
PMID: 27216254
DOI: 10.1186/s13326-015-0044-y

[…] of miR-target gene relations without regard to disease, and rely on relatively simple text mining techniques, such as co-occurrence of miR and disease in the same sentence or abstract. These include miRSel [] and the tools used by the miR-target databases miRWalk [], TarBase [], and miRTarBase []. miRCancer [], is one of the few resources that uses a rule-based system to identify disease-relevant […]

call_split

Identification of miR 194 5p as a potential biomarker for postmenopausal osteoporosis

2015
PeerJ
PMCID: 4451039
PMID: 26038726
DOI: 10.7717/peerj.971
call_split See protocol

[…] ated genes on a KEGG pathway was considered statistically significant only if the Bonferroni-adjusted p < 0.05 ().An integrative retrieval from two miRNA-target interaction (MTI) databases, including miRSel () and miRTarBase (), was applied to search for experimentally validated target genes of six miRNAs, including miR-130b-3p, -133a, -151a-3p, -151b, -194-5p, and -590-5p in humans. After uploadi […]

library_books

Dissection of Protein Interactomics Highlights MicroRNA Synergy

2013
PLoS One
PMCID: 3653946
PMID: 23691029
DOI: 10.1371/journal.pone.0063342

[…] The databases miRSel and ExprTargetDB were jointly applied for obtaining reliable miRNA-gene interaction data as described before . After careful analysis of the official symbols of the target genes in the Homo S […]

Citations

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miRSel institution(s)
Institut für Informatik, Ludwig-Maximilians-Universität München, München, Germany
miRSel funding source(s)
The German Federal Ministry of Education and Research (FKZ 01GS0801); the Deutscher Akademischer Austausch Dienst (Referat 442, Code A/07/96865)

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