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miRSeqNovel specifications

Information


Unique identifier OMICS_00381
Name miRSeqNovel
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Kui Qian

Publication for miRSeqNovel

miRSeqNovel citation

library_books

Identification and Validation of Human Papillomavirus Encoded microRNAs

2013
PLoS One
PMCID: 3728184
PMID: 23936163
DOI: 10.1371/journal.pone.0070202

[…] We predicted novel virus-encoded miRNA candidates from the small RNA sequencing data using our recently developed miRSeqNovel software . The software provides convenience in adjusting the prediction parameters. Because of lacking HPV encoded miRNA annotation, we performed the prediction in two sets of parameters. […]


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miRSeqNovel institution(s)
DNA Sequencing and Genomics Laboratory, Institute of Biotechnology, University of Helsinki, Helsinki, Finland

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