MirSTP specifications

Information


Unique identifier OMICS_18165
Name MirSTP
Alternative name MIRna transcription Start sites Tracking Program
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data An alignment of GRO/PRO-seq data.
Output data The predicted miRNA TSSs.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Requirements
Beadtools
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline Scott Hiebert
  • person_outline Qi Lui

Publication for MIRna transcription Start sites Tracking Program

MirSTP institution(s)
Center for Quantitative Sciences, Vanderbilt University School of Medicine, Nashville, TN, USA; Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, TN, USA; Department of Cancer Biology, Vanderbilt University School of Medicine, Nashville, TN, USA; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, USA; Department of Statistics, National Cheng Kung University, Tainan, Taiwan; Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, TN, USA; Department of Biostatistics, Vanderbilt University School of Medicine, Nashville, TN, USA
MirSTP funding source(s)
Supported National Cancer Institute [5U01 CA163056-05, 5R01 CA178030-02, 2R01 CA064140-21A1]; Cancer Center Support Grant [2P30 CA068485-19]; NCI SPORE in GI Cancer Career Development Award [P50 CA095103].

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