miRTCat specifications

Information


Unique identifier OMICS_27564
Name miRTCat
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained No

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Maintainer


This tool is not available anymore.

Publication for miRTCat

miRTCat citation

library_books

Abasic pivot substitution harnesses target specificity of RNA interference

2015
Nat Commun
PMCID: 4703836
PMID: 26679372
DOI: 10.1038/ncomms10154

[…] ython scripts, UCSC genome browser (http://genome.ucsc.edu/), and Galaxy (http://galaxy.psu.edu), as described previously. For the analysis of miRNA target sites, we used miRTCat (http://ion.skku.edu/mirtcat/). Hierarchical clustering was performed by using Cluster program and visualized as a heat map by using Treeview (http://rana.lbl.gov/EisenSoftware.htm), as described previously. GO analysis w […]

miRTCat institution(s)
Samsung Biomedical Research Institute, Seoul, Korea; Department of Health Sciences and Technology, Samsung Advanced Institute for Health Sciences and Technology, Sungkyunkwan University, Seoul, Korea; Samsung Research Institute for Future Medicine, Samsung Medical Center, Seoul, Korea
miRTCat funding source(s)
Supported by the Korean Health Technology R&D Project, Ministry of Health & Welfare (A111989).

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