Tool stats & trends
Looking to identify usage trends or leading experts?
|Alternative name||MicroRNA:Target Interaction Filter|
|Interface||Web user interface|
|Restrictions to use||Academic or non-commercial use|
|Input data||miRNA:Target interaction pairs or miRNA:Target duplex|
- person_outline Kuo-Bin Li
Publication for MicroRNA:Target Interaction Filter
Genetic Variations Creating MicroRNA Target Sites in the FXN 3′ UTR Affect Frataxin Expression in Friedreich Ataxia
[…] fix.com). MiRiFix integrates predictions from Diana microT 3.0 , Target Scan 5.1 , microRNA.org (2008 release; ) and PicTar , as well as RegRNA , Rna22 , FindTar3 (http://bio.sz.tsinghua.edu.cn/) and MiRTif, which is a support vector machine-based miRNA-target filtering-system to distinguish true predicted target sites from false ones . miRNA expression profiling data were accessed through MirZ a […]
One Decade of Development and Evolution of MicroRNA Target Prediction Algorithms
[…] The positive and negative datasets contain 195 and 21 interactions with experimental support, respectively. In addition, the negative dataset contains 17 interactions inferred from experimental data. MiRTif is available online (http://mirtif.bii.a-star.edu.sg/).•TargetMiner first selects a set of sites based on the seed complementarity. It then uses an SVM classifier (RBF kernel) based on mRNA an […]
In silico method for systematic analysis of feature importance in microRNA mRNA interactions
[…] ethod. Our results prove that stems greatly contribute to recognition of miRNA-target interactions. More systematic analysis of dinucleotide and trinucleotide sequences was carried out in this study. MiRTif uses various k-gram frequencies as features for a triplet SVM classifier to predict pre-miRNA [,]. It is thought that these features represent the real environment for miRNA-target interactions […]
Looking to check out a full list of citations?
Be the first to review MiRTif