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An integrated web server was developed to investigate ncRNA sequences, expression levels, differentially expressed ncRNAs and miRNA-targeted genes and their functional annotation, which will be valuable for deciphering the functional roles of ncRNAs hidden in the large amount of NGS data. The web server mirTools 2.0 was developed for research communities toward a fully automated and easy to use web service suitable for ncRNA discovery, profiling and functional annotation based on high-throughput sequencing.

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mirTools classification

mirTools specifications

Web user interface
Computer skills:
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mirTools support


  • Qinghua Shi <>


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Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences; University of Science and Technology of China; Hefei, China; Institute of Genomic Medicine; Wenzhou Medical College; Wenzhou, China

Funding source(s)

This study was supported by the National Natural Science Foundation of China (grant no. 31171236), the National High Technology Research and Development Program of China (2012AA02A201), the Key Science and Technology Innovation Team of Zhejiang Province (2012R10048-05) and the International S&T Cooperation Program of China (2011DFA30670).

Link to literature

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