mirTrios specifications

Information


Unique identifier OMICS_16466
Name mirTrios
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input format VCF
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Information


Unique identifier OMICS_16466
Name mirTrios
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Stability No
Maintained No

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Publication for mirTrios

mirTrios in publication

PMCID: 5428060
PMID: 28325891
DOI: 10.1038/s41598-017-00208-6

[…] locations were removed with the picard software tool. gatk tools were used for the read realignment, quality score recalibration and snp/indel variant calling. two software tools (forestdnm and mirtrios) were used for de novo mutation detection, and mutations indicated to be de novo using both tools were considered as reliable de novo mutations for further analysis in the present study., […]


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mirTrios institution(s)
Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing, China; Institute of Genomic Medicine, Wenzhou Medical University, Wenzhou, China; State Key Laboratory of Medical Genetics, Central South University, Changsha, China
mirTrios funding source(s)
The project was funded by the National Basic Research Program of China (No. 2012CB517902 and 2012CB517904), the National "12th Five-Year" scientific and technological support projects (No. 2012BAI03B02), and the Special Funds of National Health and Family Planning Commission of China (No. 201302002).

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