misFinder statistics

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Citations per year

Number of citations per year for the bioinformatics software tool misFinder
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Tool usage distribution map

This map represents all the scientific publications referring to misFinder per scientific context
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Associated diseases

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misFinder specifications

Information


Unique identifier OMICS_10647
Name misFinder
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data The information of reference (or close related reference) genome and aligned paired-end reads to the assembled sequence
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Documentation


Maintainer


  • person_outline Xiao Zhu

Publication for misFinder

misFinder citation

library_books

Reference genome assessment from a population scale perspective: an accurate profile of variability and noise

2017
Bioinformatics
PMCID: 5870781
PMID: 28961772
DOI: 10.1093/bioinformatics/btx482

[…] s a pair-end mapped sample of similar characteristics to the evaluated reference genome in order to detect incongruous genomic patterns that are directly related to assembly artifacts. More recently, misFinder () combined a similar approach with the help of a near species reference genome, also provided by QUAST (). Additionally, some other tools have appeared to cover specific contexts like bacte […]


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misFinder institution(s)
College of Computer Sciences and Information Engineering, Harbin Normal University, Harbin, Heilongjiang, China; Center for Bioinformatics, School of Computer Sciences and Technology, Harbin Institute of Technology, Harbin, Heilongjiang, China

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