MiSPU specifications

Information


Unique identifier OMICS_22902
Name MiSPU
Alternative names Microbiome-based Sum of powered score, aMiSPU
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A rooted phylogenetic tree, a sample of OTU counts, an outcome of interest, and possibly some covariates.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.0
Stability Stable
Requirements vegan,ape,aSPU,cluster
Maintained Yes

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Maintainers


  • person_outline Pan W. <>
  • person_outline Chong Wu <>

Publication for Microbiome-based Sum of powered score

MiSPU institution(s)
Division of Biostatistics, University of Minnesota, Minneapolis, MN, USA; Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, NY, USA
MiSPU funding source(s)
Supported by National Institutes of Health grants R01GM113250, R01HL105397, and R01HL116720, by the Center for Individualized Medicine at Mayo Clinic, and the Minnesota Supercomputing Institute.

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