MISTRAL pipeline

MISTRAL specifications


Unique identifier OMICS_03678
Alternative name Multiple STRuctural Alignment
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for Multiple STRuctural Alignment

MISTRAL IN pipelines

PMCID: 4599027
PMID: 26449279
DOI: 10.1186/s12900-015-0046-0

[…] [59]): we selected 23 unique rna and dna ligases whose structure have the highest percentage of identity and the lowest root mean square deviation (rmsd), and performed a multiple structural alignment including dprnl. for subsequent computations, we used the alignment without expanding the gaps, meaning that inserted segments relative to dprnl are hidden. […]

PMCID: 3273431
PMID: 22244187
DOI: 10.1186/1471-2148-12-4

[…] all model structures predicted here had been deposited in protein model database [86] under id numbers pm0077184-pm0077186 and pm0077307-pm0077312. structural alignment was performed using the mistral online server [87]. pymol [88] was used to visualize the structure and locate the positively selected sites., to estimate the differential expression of ixodes scapularis genes […]

PMCID: 3235984
PMID: 18389302
DOI: 10.1007/s00239-008-9075-7

[…] modeled from structures of the eukaryotic proteasome and hslv. bph from thiobacillus denitrificans has 22% sequence identity to the structure of hslv. we built a multiple sequence alignment from a multiple structural alignment for each cluster using combinatorial extension (shindyalov and bourne 1998) and built a tree using maximum likelihood (fig. 2). this was done to increase the quality […]

MISTRAL institution(s)
SISSA, CNR-INFM Democritos and Italian Institute of Technology, Trieste, Italy

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