MAK specifications

Information


Unique identifier OMICS_15040
Name MITE analysis kit
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data Some genomic sequences.
Input format FASTA
Output data The sequences with defined number of flanking sequences at both ends, the long elements within the defined range, the positions of the long elements, the distance and positions of MITEs to closest genes, product and putative function.
Output format FASTA
Operating system Unix/Linux, Windows
Programming languages Perl
Computer skills Advanced
Stability Stable
Requirements BioPerl
Maintained Yes

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MAK article

MAK institution(s)
Institute of Developmental and Molecular Biology and Department of Biology, Texas A&M University,College Station, TX, USA
MAK funding source(s)
Supported in part by NSF grant MCB-0110477.

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