miTEA specifications

Information


Unique identifier OMICS_11975
Name miTEA
Alternative name miRNA Target Enrichment Analysis
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A ranked list of genes/proteins
Input format Gene symbol, protein/gene RefSeq, Uniprot, Unigene or Ensembl
Output data The output consists of a colour-coded miRNA network, where the nodes are the enriched miRNAs and an edge between two nodes is present if the corresponding miRNAs have substantial overlap in their target genes. The network’s nodes are colour-coded according to the detected enrichment levels. The output also includes a table consisting of the enriched miRNAs (with web links to additional information), statistical characterization of the results and the set of targeted genes found to be enriched in the top. Results can be exported to Excel.
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Invertebrates
    • Drosophila melanogaster
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio

Maintainer


  • person_outline Israel Steinfeld <>

Publication for miRNA Target Enrichment Analysis

miTEA institution(s)
Computer Science Department, Technion—Israel Institute of Technology, Haifa, Israel; Agilent Laboratories, Agilent Technologies, Tel Aviv, Israel; Agilent Laboratories, Agilent Technologies, Santa Clara, CA, USA
miTEA funding source(s)
EU FP7 project GlycoHIT (in part)

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