MoccaDB specifications


Unique identifier OMICS_06477
Name MoccaDB
Restrictions to use None
Database management system MySQL
Maintained No

Publication for MoccaDB

MoccaDB citations


Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species

Ecol Evol
PMCID: 4829533
PMID: 27096083
DOI: 10.1002/ece3.2055

[…] genome (Denoeud et al. ) and showing good amplification and high polymorphism information content (PIC) according to Poncet et al. (, ). PCR conditions and all information on the markers are given in MoccaDB (; Plechakova et al. ) and in the coffee genome hub (Dereeper et al. ).Two chloroplastic microsatellite (cpSSRs) loci, with species‐specific alleles, were designed bas […]


Ancestral synteny shared between distantly related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades

BMC Genomics
PMCID: 3372433
PMID: 22433423
DOI: 10.1186/1471-2164-13-103

[…] the phylogenic distances between our study species and genome coverage data of the available maps.The final maps were integrated into the CMAP comparative map viewer tool in MoccaDB and displayed using CIRCOS []. […]

MoccaDB institution(s)
UMR DIAPC, IRD, Montpellier, France

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