MochiView pipeline

MochiView specifications

Information


Unique identifier OMICS_02174
Name MochiView
Alternative name Motif and Chip Viewer
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Version 1.46
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/MochiView

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Documentation


Maintainer


  • person_outline Oliver Homann <>

Publication for Motif and Chip Viewer

MochiView IN pipeline

2015
PMCID: 4531262
PMID: 26153861
DOI: 10.1038/nature14613

[…] reads were indexed and aligned to the genome using bowtie 244. file types were manipulated using samtools45, and peaks were called using macs46. coverage and peak calls were visualized in mochiview47. the chip experiment was performed with a total of three replicates on two separate days, and a single replicate was performed of the untagged control., k. lactis reporter strains […]

MochiView institution(s)
Department of Microbiology and Immunology, University of California San Francisco, San Francisco, CA, USA; Department of Biochemistry and Biophysics, University of California San Francisco, San Francisco, CA, USA
MochiView funding source(s)
Supported by NIH grant 5R01GM37049-22.

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