mgsa specifications

Information


Unique identifier OMICS_16691
Name mgsa
Alternative name Model-based gene set analysis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 1.22.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Julien Gagneur <>

mgsa article

mgsa citation

2012
PMCID: 3329418

[…] exact test, which need to employ some type of smoothing (e.g., laplace or add one smoothing). bayesian methods that perform enrichment analysis using a prior probability distribution include mgsa and the baygo framework [26]. although these bayesian methods enable the enrichment analysis of sparse data, their lack of support for inter-instance relationships, non-hierarchical class […]

mgsa institution(s)
Institute for Medical Genetics, Charité-Universitätsmedizin Berlin, Berlin, Germany; Max Planck Institute for Molecular Genetics, Berlin, Germany; Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charité-Universitätsmedizin Berlin, Berlin, Germany; European Molecular Biology Laboratory, Heidelberg, Germany
mgsa funding source(s)
Supported by Deutsche Forschungsgemeinschaft (DFG RO 2005/4-1).

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