MODELLER protocols

MODELLER specifications


Unique identifier OMICS_05059
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 9.15
Stability Stable
Maintained Yes


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  • person_outline Ben Webb <>

Publications for MODELLER

MODELLER IN pipeline

PMCID: 5041579
PMID: 27683084
DOI: 10.1186/s13023-016-0509-9

[…] the amino acid sequence of spata5 was analysed using pfam [10] and two aaa atpase domains spanning residues 390–523 and 664–796, respectively, were identified. then, modeling was performed with modeller 9.9 [11] using the crystal structure of the hexamieric atpase p97 (pdb code: 3cf2) [12] as a template. the resulting model was verified using procheck [13] and whatcheck [14] and revealed […]

MODELLER institution(s)
Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA; Department of Pharmaceutical Chemistry, California Institute for Quantitative Biosciences (QB3), University of California San Francisco, San Francisco, CA, USA

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