MODELLER specifications

Information


Unique identifier OMICS_05059
Name MODELLER
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 9.15
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Ben Webb <>

MODELLER articles

MODELLER citations

 (2)
2016
PMCID: 5041579

[…] the amino acid sequence of spata5 was analysed using pfam [10] and two aaa atpase domains spanning residues 390–523 and 664–796, respectively, were identified. then, modeling was performed with modeller 9.9 [11] using the crystal structure of the hexamieric atpase p97 (pdb code: 3cf2) [12] as a template. the resulting model was verified using procheck [13] and whatcheck [14] and revealed […]

2010
PMCID: 3039947

[…] of the wt and g389e extreme ctd in complex with s100b were generated. the geometrical consistency of the models was evaluated based on the probability density function (pdf) violations provided by modeller. after visual inspection using the computer graphics program discovery studio 2.1 (accelrys inc.), a representative model from each set, used for all subsequent studies, was chosen, […]

MODELLER institution(s)
Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA; Department of Pharmaceutical Chemistry, California Institute for Quantitative Biosciences (QB3), University of California San Francisco, San Francisco, CA, USA

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