moFF specifications

Unique identifier:
OMICS_13862
Software type:
Package/Module
Restrictions to use:
None
Input format:
simple tab-separated, mzML
Operating system:
Unix/Linux
License:
Apache License version 2.0
Stability:
Stable
Maintained:
Yes
Name:
modest Feature Finder
Interface:
Command line interface, Graphical user interface
Input data:
Sequence of the peptide, protein ID, peptide retention time, mass over charge, mass of the peptide, charge of the ionized peptide
Output data:
the apex intensity values
Programming languages:
Python
Computer skills:
Advanced
Requirements:
Pandas, Numpy, Argparse, SciKit-learn, PymzML

versioning

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moFF distribution

download

moFF support

Documentation

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Publications

Institution(s)

Department of Medical Protein Research, Ghent, Belgium; Department of Biochemistry, Ghent University, Ghent, Belgium; Bioinformatics Institute Ghent, Ghent University, Ghent, Belgium; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium; Department of Plant Systems Biology, VIB, Ghent University, Zwijnaarde, Belgium.

Funding source(s)

This work was supported by the Ghent University Multidisciplinary Research Partnership “Bioinformatics: from nucleotides to networks” (01MR0410), Ghent University grant BOF12/GOA/014, the IWT SBO grant “INSPECTOR” (120025) and IWT SBO grant “Differential proteomics at peptide, protein and module level” (141573).

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