ModifiComb specifications

Information


Unique identifier OMICS_06805
Name ModifiComb
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Publication for ModifiComb

ModifiComb citation

library_books

ROSICS: CHEMISTRY AND PROTEOMICS OF CYSTEINE MODIFICATIONS IN REDOX BIOLOGY

2014
PMCID: 4340047
PMID: 24916017
DOI: 10.1002/mas.21430

[…] ew types of PTMs. MS-Alignment (Tsur et al., ) predicts PTMs expected in a sample by comparing spectral alignment between database peptide and a spectrum followed by InsPecT search (Tanner et al., ). ModifiComb introduced a ΔM histogram between unassigned spectra and base peptides in a database (Savitski, Nielsen, & Zubarev, ). However, these tools have the drawback that they miss low abundant PTM […]

ModifiComb institution(s)
The Laboratory for Biological and Medical Mass Spectrometry, Uppsala University, Uppsala, Sweden
ModifiComb funding source(s)
Supported by the Knut and Alice Wallenberg Foundation and Wallenberg Consortium North Grant WCN2003-UU/SLU009 as well as Swedish Research Council Grants 621-2004-4897 and 621-2003-4877.

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