ModifiComb specifications
Information
| Unique identifier | OMICS_06805 |
|---|---|
| Name | ModifiComb |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Computer skills | Advanced |
| Stability | No |
| Maintained | No |
Versioning
No version available
Publication for ModifiComb
2006 Mol Cell Proteomics
PMID: 16439352
ModifiComb citation
library_books
ROSICS: CHEMISTRY AND PROTEOMICS OF CYSTEINE MODIFICATIONS IN REDOX BIOLOGY
2014
PMCID: 4340047
PMID: 24916017
DOI: 10.1002/mas.21430
[…] ew types of PTMs. MS-Alignment (Tsur et al., ) predicts PTMs expected in a sample by comparing spectral alignment between database peptide and a spectrum followed by InsPecT search (Tanner et al., ). ModifiComb introduced a ΔM histogram between unassigned spectra and base peptides in a database (Savitski, Nielsen, & Zubarev, ). However, these tools have the drawback that they miss low abundant PTM […]
ModifiComb institution(s)
The Laboratory for Biological and Medical Mass Spectrometry, Uppsala University, Uppsala, Sweden
ModifiComb funding source(s)
Supported by the Knut and Alice Wallenberg Foundation and Wallenberg Consortium North Grant WCN2003-UU/SLU009 as well as Swedish Research Council Grants 621-2004-4897 and 621-2003-4877.
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