A cross-platform software pipeline that allows comprehensive processing of immune repertoire sequencing data, specifically focused on molecular barcoding for molecule counting and error correction.

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MiGEC forum

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MiGEC versioning

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MiGEC classification

MiGEC specifications

Software type:
Package
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
Apache License version 2.0
Stability:
Stable
Interface:
Command line interface
Biological technology:
Illumina
Programming languages:
Java
Computer skills:
Advanced

Credits

Publications

  • (Shugay et al., 2014) Towards error-free profiling of immune repertoires. Nature methods.
    PMID: 24793455

Link to literature

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