A cross-platform software pipeline that allows comprehensive processing of immune repertoire sequencing data, specifically focused on molecular barcoding for molecule counting and error correction.

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MiGEC forum

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MiGEC versioning

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MiGEC classification

MiGEC specifications

Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
License:
Apache License version 2.0
Stability:
Stable
Interface:
Command line interface
Biological technology:
Illumina
Programming languages:
Java
Computer skills:
Advanced
Maintained:
Yes
Issue URL:
https://github.com/mikessh/migec/issues

Credits

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Publications

Institution(s)

Shemiakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Science, Moscow, Russia; Pirogov Russian National Research Medical University, Moscow, Russia; Central European Institute of Technology, Masaryk University, Brno, Czech Republic

Link to literature

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