MolLoc specifications

Information


Unique identifier OMICS_03673
Name MolLoc
Alternative name Molecular Local surface comparison
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Publication for Molecular Local surface comparison

MolLoc in publications

 (2)
PMCID: 4594084
PMID: 26457119
DOI: 10.1186/s13321-015-0096-0

[…] of each pair exhibited different folds but had known similar binding sites and performed a similar function. probis was compared to three different structural alignment algorithms; dalilite [], molloc [] and multibind []. the comparison between the methods was made by calculating the rmsd between previously identified, similar binding site residues, after the proteins in the pair […]

PMCID: 2957401
PMID: 20920230
DOI: 10.1186/1471-2105-11-488

[…] the matching problem. our method is capable of generating very accurate local alignments. we benchmark it on various sets of protein structures from the pdb [], and compare its performance with that molloc []., in this section we introduce some notations and assumptions that will be used throughout the paper. given two protein structures p and q, let us denote by p and q the two finite sets […]


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MolLoc institution(s)
Department of Information Engineering, University of Padova, Padova, Italy; Department of Statistics, Purdue University, West Lafayette, IN, USA; College of Computing, Georgia Institute of Technology, Atlanta, GA, USA

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