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morFeus specifications

Information


Unique identifier OMICS_08022
Name morFeus
Interface Web user interface
Restrictions to use None
Programming languages Java, PHP, Python
License GNU General Public License version 2.0
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Bianca H. Habermann <>

Publication for morFeus

morFeus in pipeline

2015
PMCID: 4595607
PMID: 26382858
DOI: 10.1038/ncomms9192

[…] (5′-tttccaacatataacgtacagctttt-3′ and 5′-ctacgtggagctgagccagt-3′), huncbp3 (5′-gcaggaagacagttcagatg-3′ and 5′-acttcttctggctgctccaa-3′)., orthologous sequences were collected using the web-server morfeus (http://chimborazo.biochem.mpg.de/morfeus). the multiple sequence alignment was generated using mafft and submitted to the gblocks web-server to select conserved blocks […]


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morFeus in publications

 (6)
PMCID: 5879734
PMID: 29609631
DOI: 10.1186/s13014-018-1007-0

[…] superiorly during expiration but displayed diversity in the lr direction. several studies applied 4dct with dir to analyze liver motion. velec et al. deformed ct contours from exhale to inhale using morfeus, a multi-organ biomechanical model–based dir algorithm []. hallman et al. propagated contours that were mostly defined at the phase 30 ct to all other phases using a 3-stage multi-resolution […]

PMCID: 5223487
PMID: 28073377
DOI: 10.1186/s13014-016-0762-z

[…] therapy, helical tomotherapy is one of the techniques for overcoming the effects of respiration during abdominal tumor radiotherapy [, ]., liver deformable registration can be evaluated using morfeus, a finite element model (fem)-based multiorgan deformable image registration method developed by raystation tps (raysearch laboratories ab, stockholm, sweden) [, ]. because of our lack […]

PMCID: 4595607
PMID: 26382858
DOI: 10.1038/ncomms9192

[…] (5′-tttccaacatataacgtacagctttt-3′ and 5′-ctacgtggagctgagccagt-3′), huncbp3 (5′-gcaggaagacagttcagatg-3′ and 5′-acttcttctggctgctccaa-3′)., orthologous sequences were collected using the web-server morfeus (http://chimborazo.biochem.mpg.de/morfeus). the multiple sequence alignment was generated using mafft and submitted to the gblocks web-server to select conserved blocks […]

PMCID: 4205285
PMID: 25319176
DOI: 10.1186/s13014-014-0221-7

[…] reviewed by a second radiation oncologist for accuracy. to reduce inconsistency in the contours, standardized window settings were used for the liver (w/l 350/ 50)., dr analysis was performed using morfeus, a finite element model (fem)-based multi-organ deformable image registration method that has been developed by raystation tps []. in this study, the apce 3d ct image in end-expiration breath […]

PMCID: 3649969
PMID: 23675310
DOI: 10.1371/journal.pgen.1003499

[…] in the rt domain (d709a) was introduced in this construct using the quikchange ii xl site-directed mutagenesis kit (agilent technologies) and the dna primer pair lou419-lou420 to generate pvan330 (morfeus rt*). the rt* mutation introduces a new sacii restriction site in orf2, allowing quick screening of the mutation. the latter was confirmed by sequencing. a sdai-nrui dna fragment containing […]


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morFeus institution(s)
Max Planck Institute of Biochemistry, Martinsried, Germany
morFeus funding source(s)
MV was supported by BMBF-Project 01IH11003C (NGSgoesHPC), JMV was supported by BMBF-Project 0315759 (The Virtual Liver Network (VLN)). This work was supported by the Max Planck Society.

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