Protocols

MOsDB specifications

Information


Unique identifier OMICS_03275
Name MOsDB
Alternative name MIPS Rice (Oryza sativa) DataBase
Restrictions to use None
Maintained Yes

Taxon


  • Plants and Fungi
    • Oryza sativa

Publication for MIPS Rice (Oryza sativa) DataBase

MOsDB citation

call_split

Patterns of expansion and expression divergence in the plant polygalacturonase gene family

2006
Genome Biol
PMCID: 1794546
PMID: 17010199
DOI: 10.1186/gb-2006-7-9-r87
call_split See protocol

[…] he Pfam HMM models from GenBank polypeptide sequences; The PGs of O. sativa subsp. indica were identified from predicted coding sequences obtained from Dr. W. Karlowski in MIPS Oryza sativa Database (MosDB) [] with a similar procedure outlined above. The rice PG sequences appeared highly redundant, and thus almost 30% of the entries that were more than 99% identical at the nucleotide level were el […]

MOsDB institution(s)
MIPS/Institute for Bioinformatics, GSF National Research Center for Environment and Health, Neuherberg, Germany

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