MotifClick statistics

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Associated diseases

Associated diseases

MotifClick specifications


Unique identifier OMICS_06269
Name MotifClick
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability No
Maintained Yes


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Publication for MotifClick

MotifClick in publications

PMCID: 4287501
PMID: 25294412
DOI: 10.1186/1471-2164-15-877

[…] [], and up to 20 through the identification of half-sites motifs []. (2) we also evaluated the performance of our methodology by comparing our results with those obtained with an independent method, motifclick, that predicts cis-regulatory regions using a graph-based polynomial-time algorithm []. after running both predictors over intergenic e. coli regions, we observed that the densities […]

PMCID: 3751785
PMID: 23957885
DOI: 10.1186/1471-2229-13-118

[…] holm-bonferroni method., we identified overrepresented motifs present in the 2 kb regions upstream of populus np-like genes by performing in silico analyses using two prediction programs, meme and motifclick [,]. we identified motifs that correspond to known cis-regulatory elements (cres) from the transcription factor (tf) database consolidator program plantpan []. of the 200 motifs identified […]

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MotifClick institution(s)
Department of Bioinformatics and Genomics, Center for Bioinformatics Research, the University of North Carolina at Charlotte, NC, USA

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