motifmatchr statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool motifmatchr

Tool usage distribution map

This map represents all the scientific publications referring to motifmatchr per scientific context
info info

Associated diseases


Popular tool citations

chevron_left Motif comparison chevron_right
Want to access the full stats & trends on this tool?

motifmatchr specifications


Unique identifier OMICS_19118
Name motifmatchr
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C++, R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.99.8
Stability Stable
Maintained Yes




No version available


  • person_outline Alicia Schep

motifmatchr citation


INO80 Chromatin Remodeling Coordinates Metabolic Homeostasis with Cell Division

Cell Rep
PMCID: 5949282
PMID: 29346761
DOI: 10.1016/j.celrep.2017.12.079

[…] d as described previously (). The ATAC-seq signal in promoters was quantified as the number of fragments mapping to the window 400 bp upstream to 100 bp downstream of the TSS. For motif analysis, the Motifmatchr R package was used to identify motifs from the JASPAR 2016 database () using a p value threshold of 10−4. Accessibility scores for promoters and motif-containing promoters were determined […]

Want to access the full list of citations?

motifmatchr reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review motifmatchr