MotifSuite statistics

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Citations per year

Number of citations per year for the bioinformatics software tool MotifSuite
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Tool usage distribution map

This map represents all the scientific publications referring to MotifSuite per scientific context
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MotifSuite specifications

Information


Unique identifier OMICS_09254
Name MotifSuite
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Kathleen Marchal

Information


Unique identifier OMICS_09254
Name MotifSuite
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Kathleen Marchal

Publication for MotifSuite

MotifSuite citation

library_books

Evolutionary Conservation and Diversification of Puf RNA Binding Proteins and Their mRNA Targets

2015
PLoS Biol
PMCID: 4654594
PMID: 26587879
DOI: 10.1371/journal.pbio.1002307

[…] similarity between motifs, we used position frequency matrices from the six positions downstream of UGUA as input to MotifComparison (p-BLiC, 100 shuffles, no shift permitted between matrices) in the MotifSuite []. MotifComparison calculated the p-value of the Bayesian Likelihood 2-Component (BLiC) score [], and we considered two motifs to be similar if p < 0.05.Motifs are displayed as sequence lo […]


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MotifSuite institution(s)
Department of Microbial and Molecular Systems, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Germany; Department of Electrical Engineering, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Heverlee, Belgium; School of Life Sciences—LifeNet, Freiburg Institute for Advanced Studies (FRIAS), University of Freiburg, Freiburg, Germany; Department of Plant Biotechnology and Bioinformatics (VIB), Ghent University, Technologiepark, Ghent, Belgium
MotifSuite funding source(s)
KU Leuven funding: (GOA/08/011, CoE EF/05/007); Agentschap voor Innovatie door Wetenschap en Technologie (IWT): (SBO-BioFrame); Interuniversity Attraction Poles (IAP) (P6/25); Fonds Wetenschappelijk Onderzoek-Vlaanderen (FWO): (IOK-B9725-G.0329.09, 5); Ghent University: (Multidisciplinary Research Partnership ‘M2N’)

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