MotifSuite specifications

Information


Unique identifier OMICS_09254
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Kathleen Marchal <>

Information


Unique identifier OMICS_09254
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Kathleen Marchal <>

MotifSuite article

MotifSuite citation

2017
PMCID: 5714201

[…] core database (25). peak sequences (input sequence) were scanned using the motiflocator software (26). the second-order custom background model was created by createbackgroundmodel software in motifsuite using all peak sequences (26). to assess the statistical significance of motiflocator scores, we randomized the input sequence and applied motiflocator to the randomized sequence using […]

MotifSuite institution(s)
Department of Microbial and Molecular Systems, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Germany; Department of Electrical Engineering, Katholieke Universiteit Leuven, Kasteelpark Arenberg, Heverlee, Belgium; School of Life Sciences—LifeNet, Freiburg Institute for Advanced Studies (FRIAS), University of Freiburg, Freiburg, Germany; Department of Plant Biotechnology and Bioinformatics (VIB), Ghent University, Technologiepark, Ghent, Belgium
MotifSuite funding source(s)
KU Leuven funding: (GOA/08/011, CoE EF/05/007); Agentschap voor Innovatie door Wetenschap en Technologie (IWT): (SBO-BioFrame); Interuniversity Attraction Poles (IAP) (P6/25); Fonds Wetenschappelijk Onderzoek-Vlaanderen (FWO): (IOK-B9725-G.0329.09, 5); Ghent University: (Multidisciplinary Research Partnership ‘M2N’)

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