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mQTL specifications
Information
| Unique identifier | OMICS_09779 |
|---|---|
| Name | mQTL |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Input data | Datafiles |
| Output data | Datafine, plots, etc |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | R |
| License | Artistic License version 2.0 |
| Computer skills | Advanced |
| Version | 1.14.0 |
| Stability | Stable |
| Requirements |
stats, graphics, utils, R(>=2.15.0), BiocStyle, MASS, outliers, qtl, GenABEL
|
| Maintained | Yes |
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Documentation
- Documentation: http://www.ican-institute.org/tools/
Maintainer
- person_outline mqtl <>
Publication for mQTL
library_books
MQTL.NMR: an integrated suite for genetic mapping of quantitative variations of (1)H NMR-based metabolic profiles.
2015 Anal Chem
PMID: 25803548
mQTL in publication
PMCID: 5045612
PMID: 27716393
DOI: 10.1186/s13073-016-0352-6
[…] (gk) rat transferred onto the genomic background of normoglycemic brown-norway (bn) rats for metabolic and gene expression profiling in adipose tissue. we then carried out a joint eqtl and mqtl analysis and mapped the associated genes and metabolites onto metabolic networks. through topological analysis, we implemented a parsimonious approach (i.e., occam’s razor) by minimizing […]
mQTL institution(s)
Institute of Cardiometabolism and Nutrition (ICAN), Department of Omics Sciences, University Pierre & Marie Curie, Paris, France; School of Medicine, Lebanese American University, Lebanon; Section of Biomolecular Medicine, Division of Computational and Systems Medicine, Department of Surgery and Cancer, Faculty of Medicine, Imperial College London, Sir Alexander Fleming building, London, UK; Sorbonne Universities, University Pierre & Marie Curie, University Paris Descartes, Sorbonne Paris Cité, INSERM UMR_S 1138, Cordeliers Research Centre, Paris, France; Department of Oncology, University of Oxford, Roosevelt Drive, Oxford, UK; Centre for Computational Biology, University of Birmingham, Haworth Building, Edgbaston, UK
mQTL funding source(s)
This work was supported by grants from the European Community’s Seventh Framework Programme under grant agreement HEALTH-F4-2010-241504 (EURATRANS), the Agence Nationale pour la Recherche (ANR-08-GENOPAT-030), Cancer Research UK (C25255/A18085), and the Institute of Cardiometabolism and Nutrition (ICAN, ANR-10-IAHU-05).
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