MREdictor specifications

Information


Unique identifier OMICS_27460
Name MREdictor
Alternative name miRNA recognition elements predictor
Interface Web user interface
Restrictions to use None
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus

Maintainer


  • person_outline Oliviero S.

Publication for miRNA recognition elements predictor

MREdictor citation

library_books

Tiny giants of gene regulation: experimental strategies for microRNA functional studies

2016
PMCID: 4949569
PMID: 26950183
DOI: 10.1002/wdev.223

[…] on miRNA activity. Currently, the number of miRNA target prediction programs that take into consideration RBP motifs is very limited. One of the first computational tools to fulfill this criterion is MREdictor, an algorithm that evaluates the impact of target site accessibility and the presence of Pumilio recognition element (PRE) motifs in the proximity of MREs. Interestingly, analysis of functio […]

MREdictor institution(s)
Human Genetics Foundation (HuGeF), Torino, Italy; Dipartimento di Biotecnologie, Chimica e Farmacia, Universita degli Studi di Siena, Siena, Italy; Siena Biotech, Siena, Italy
MREdictor funding source(s)
Supported by Associazione Italiana Ricerca sul Cancro (AIRC), Regione Toscana programma salute and Ministero della Salute Bando Cellule Staminali.

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