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Mass spectrometry-based untargeted metabolomic software tools

Mass spectrometry software tools

MS-based untargeted metabolomics applications

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MS-based untargeted metabolomics workflow schema

Metabolomics is an emerging field of study in post-genomics, which aims at comprehensive analysis of small organic molecules in biological systems (Patti et al., 2012). Techniques of mass spectrometry coupled to liquid chromatography (LC–MS) stand out as dominant methods in metabolomic experiments (Dettmer et al., 2007).
Curator: Victor Sabarly

MS-based untargeted metabolomics Curator
Victor Sabarly avatar
Victor Sabarly

Most Recent Tools

new
OMIC_12472
Lipid identification

Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences
LOBSTAHS

A multifunction package for screening, annotation, and putative identification of mass…

A multifunction package for screening, annotation, and putative identification of mass spectral features in large, HPLC-MS lipid datasets. In silico databases for a wide range of lipids, oxidized lipids, and oxylipins can be generated from…

new
OMIC_12457
Data preprocessing

BatMass

A software package which allows to perform quick quality control of raw LC/MS data…

A software package which allows to perform quick quality control of raw LC/MS data through its fast visualization capabilities. BatMass also serves as a testbed for developers of LC/MS data processing algorithms by providing a data access library…

new
OMIC_12427
Metabolite identification

Mass Isotopolome Analyzer
MIA

A software tool to determine, visualize and analyze mass isotopomer distributions across…

A software tool to determine, visualize and analyze mass isotopomer distributions across multiple GC–EI-MS datasets in a non-targeted manner. MIA helps to reveal changes in metabolic fluxes, visualizes metabolic proximity of isotopically enriched…

new
OMIC_11790
Data preprocessing

intelligent Metabolomic Quantitation
iMet-Q

An automated tool with friendly user interfaces for quantifying metabolites in full-scan…

An automated tool with friendly user interfaces for quantifying metabolites in full-scan liquid chromatography-mass spectrometry (LC-MS) data. iMet-Q has a complete quantitation procedure for noise removal, peak detection and peak alignment.…

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