Mass spectrometry-based untargeted metabolomic software tools

Metabolomics is an emerging field of study in post-genomics, which aims at comprehensive analysis of small organic molecules in biological systems (Patti et al., 2012). Techniques of mass spectrometry coupled to liquid chromatography (LC–MS) stand out as dominant methods…

MS-based untargeted metabolomics steps

MS-based untargeted metabolomics workflow

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MS-based untargeted metabolomics workflow schema

Mass spectrometry-based untargeted metabolomic software tools

Most Recent Tools

LipidFinder
Desktop

LipidFinder

Helps to discover new lipid molecular species. LipidFinder is a computational…

Helps to discover new lipid molecular species. LipidFinder is a computational workflow which searches three independent online databases to obtain putative identification of lipids, and assigns them…

MetDIA
Desktop

MetDIA

Extracts targeted metabolites from multiplexed mass spectrometry (MS)/MS…

Extracts targeted metabolites from multiplexed mass spectrometry (MS)/MS spectra generated using data-independent acquisition (DIA) technique. MetDIA considers each metabolite in the spectral library…

El-Maven
Desktop

El-Maven

Allows large-scale metabolomic experiments. El-Maven allows completely…

Allows large-scale metabolomic experiments. El-Maven allows completely automated processing of raw Liquide Chromatography- Mass Spectrometry (LC-MS) data from isotopomer labeling and untargeted…

MetCirc
Desktop

MetCirc

Aligns and calculates pairwise similarity scores among mass spectrometry…

Aligns and calculates pairwise similarity scores among mass spectrometry (MS)/MS spectral data. MetCirc is an open-source package to make biological sense of mass spectral similarities from…

Most Popular Tools

BatMass
Desktop

BatMass

A software package which allows to perform quick quality control of raw LC/MS…

A software package which allows to perform quick quality control of raw LC/MS data through its fast visualization capabilities. BatMass also serves as a testbed for developers of LC/MS data…

Curators for MS-based untargeted metabolomics

  • Victor Sabarly's avatar image
    Victor Sabarly
    Omics Services, Paris, France
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