MS-GFDB specifications

Information


Unique identifier OMICS_02465
Name MS-GFDB
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data It takes a set of spectra (CID, ETD, or CID/ETD pairs) and a protein database as an input and outputs peptide matches. If the input is a set of CID/ETD pairs, it outputs the best scoring peptide matches and their p values (1) using only CID spectra, (2) using only ETD spectra, and (3) using combined spectra of CID/ETD pairs.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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MS-GFDB article

MS-GFDB institution(s)
Department of Computer Science and Engineering, University of California San Diego, La Jolla, CA, USA

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