Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

MSbind

Calculates features of metastable conformations determined by putative miRNA binding sites. MSbind is a Perl package that sorts meta-stable structures by number of base pairings within the target site. It approximates the opening energies of meta-stable target sites using RNAeval. It also averages the opening energy and depth of meta-stable structures.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

0 user reviews

No review has been posted.

MSbind forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

MSbind classification

MSbind specifications

Software type:
Application/Script, Package/Module
Restrictions to use:
None
Programming languages:
Perl
Version:
1.0
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable

MSbind distribution

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

download

MSbind support

Maintainer

  • Kathleen Steinhofel <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Department of Informatics, King’s College London, London, UK; Middlesex University London, School of Science and Technology, London, UK

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.