MSC specifications


Unique identifier OMICS_00610
Name MSC
Alternative name Methylation Status Calling
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Source code URL
Maintained Yes


No version available


  • person_outline Longjie Cheng

Additional information

Publication for Methylation Status Calling

MSC citation


Reducing the risk of false discovery enabling identification of biologically significant genome wide methylation status using the HumanMethylation450 array

BMC Genomics
PMCID: 3943510
PMID: 24447442
DOI: 10.1186/1471-2164-15-51

[…] Figure S8 in Additional file provides a workflow of our probe filtering process which occurs prior to methylation status calling. Each step is outlined below:Determining probe uniqueness across genome: All probes which hybridize multiple locations in the genome have the possibility of providing confli […]

MSC institution(s)
Department of Statistics, Purdue University, West Lafayette, IN, USA
MSC funding source(s)
Supported by NSF-DMS-1000443.

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