MSGI specifications

Information


Unique identifier OMICS_09138
Name MSGI
Alternative name Medicago sativa Gene Index
Restrictions to use None
Version 1.2
Maintained Yes

Maintainer


  • person_outline Patrick Zhao

Publication for Medicago sativa Gene Index

MSGI citations

 (2)
library_books

RNA Seq for gene identification and transcript profiling of three Stevia rebaudiana genotypes

2014
BMC Genomics
PMCID: 4108789
PMID: 25001368
DOI: 10.1186/1471-2164-15-571

[…] The MISA program (http://pgrc.ipk-gatersleben.de/misa/misa.html) was used to detect simple sequence repeats (SSRs) among sequences in MSGI 1.0. The minimum number of nucleotide repeats specified during SSR analysis was 20, 10, 7, 5, 5, and 5 for mono-, di-, tri-, tetra-, penta-, and hexanucleotide repeats, respectively. The maximum […]

library_books

Using RNA Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

2011
BMC Genomics
PMCID: 3112146
PMID: 21504589
DOI: 10.1186/1471-2164-12-199

[…] The MISA program [] was used to detect simple sequence repeats (SSRs) among sequences in MSGI 1.0. The minimum number of nucleotide repeats specified during SSR analysis was 20, 10, 7, 5, 5, and 5 for mono-, di-, tri-, tetra-, penta-, and hexanucleotide repeats, respectively. The maximum […]

MSGI institution(s)
USDA-ARS, Corn Insects and Crop Genetics Research Unit, Ames, IA, USA; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, USA; USDA-ARS-Plant Science Research Unit, St. Paul, MN, USA; Samuel Roberts Noble Foundation, Ardmore, OK, USA; Present Address: Monsanto Company, Molecular Breeding Technology, Chesterfield, MO, USA

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