MSIsensor specifications

Information


Unique identifier OMICS_02192
Name MSIsensor
Software type Application/Script
Interface Command line interface
Restrictions to use None
Output data The list of microsatellites, the msi score output, the read count distribution, the somatic sites detected and the germline sites detected.
Operating system Unix/Linux
Programming languages C++
License MIT License
Computer skills Advanced
Version 0.2
Stability Stable
Maintained Yes

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Documentation


Maintainers


  • person_outline Li Ding <>
  • person_outline Kai Ye <>

Publication for MSIsensor

MSIsensor institution(s)
Departments of Genetics and Mathematics, The Genome Institute, Washington University in St. Louis, MO, USA; Department of Genetics, Division of Statistical Genomics, Washington University in St. Louis, MO, USA; Department of Medicine, Washington University in St. Louis, MO, USA; Siteman Cancer Center, Washington University in St. Louis, MO, USA
MSIsensor funding source(s)
Supported by National Human Genome Research Institute (U01HG006517) and National Cancer Institute (R01CA180006).

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