Protocols

mSPA specifications

Information


Unique identifier OMICS_23209
Name mSPA
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Beta
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline Xiang Zhang
  • person_outline Seongho Kim

Additional information


mSPA is a part of the MetaOpen tool.

Publication for mSPA

mSPA citation

call_split

Comparative Analysis of Mass Spectral Similarity Measures on Peak Alignment for Comprehensive Two Dimensional Gas Chromatography Mass Spectrometry

2013
PMCID: 3787630
PMID: 24151524
DOI: 10.1155/2013/509761
call_split See protocol

[…] The peak alignment R package mSPA [] provides five peak alignment algorithms for users (http://mrr.sourceforge.net/). The five peak alignment algorithms are PAD, PAS, SW-PAD, DW-PAS, and PAM. Here PAD is a peak alignment procedur […]

mSPA institution(s)
Department of Bioinformatics and Biostatistics, University of Louisville, Louisville, KY, USA; Department of Chemistry, University of Louisville, Louisville, KY, USA; Division of Biostatistics, Department of Medicine, Indiana University, Indianapolis, IN, USA
mSPA funding source(s)
Supported by grant (1RO1GM087735-02) through the National Institute of General Medical Sciences (NIGMS) within the National Institute of Health (NIH); (DE-EM0000197) through the Department of Energy (DOE).

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