MT-Toolbox specifications

Information


Unique identifier OMICS_01058
Name MT-Toolbox
Alternative name Molecule Tag Toolbox
Software type Toolkit/Suite
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 4.1.2
Stability Stable
Requirements
FLASH, gnuplot, clustalw
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Scott Yourstone

Publication for Molecule Tag Toolbox

MT-Toolbox citation

library_books

Design of synthetic bacterial communities for predictable plant phenotypes

2018
PLoS Biol
PMCID: 5819758
PMID: 29462153
DOI: 10.1371/journal.pbio.2003962

[…] Synthetic community sequencing data were first processed with MT-Toolbox []. Categorizable reads from MT-Toolbox (i.e., reads with correct primer and primer sequences that successfully merged with their pair) were quality filtered with Sickle by not allowing any […]

MT-Toolbox institution(s)
Curriculum in Bioinformatics and Computational Biology, University of North Carolina, Chapel Hill, NC, USA; Department of Biology, University of North Carolina, Chapel Hill, NC, USA; Curriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, NC, USA; Department of Carolina Center for Genomic Sciences, University of North Carolina, Chapel Hill, NC, USA; Howard Hughes Medical Institute, University of North Carolina, Chevy Chase, MD, USA
MT-Toolbox funding source(s)
Supported by the UNC BCB training grant [T32 GM067553-06], the Howard Hughes Medical Institute, the Gordon and Betty Moore Foundation, the National Science Foundation (IOS-0958245), and the North Carolina Biotechnology Center [2013-MRG-1110].

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