mtDNAoffice specifications

Information


Unique identifier OMICS_07998
Name mtDNAoffice
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

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Versioning


No version available

Maintainer


  • person_outline Inês Soares

Publication for mtDNAoffice

mtDNAoffice citation

library_books

Concept for estimating mitochondrial DNA haplogroups using a maximum likelihood approach (EMMA)☆

2013
PMCID: 3819997
PMID: 23948335
DOI: 10.1016/j.fsigen.2013.07.005

[…] ed in Phylotree not only facilitate manual haplogroup assignment, but they also serve as the basis for a number of software applications that perform the task (e.g. MitoTool , HmtDB , HaploGrep , and mtDNAoffice ). To date, however, none of the available automated solutions provide reliable and unbiased haplogroup estimates, especially in the case of partial mtDNA sequences . The major limitation […]

mtDNAoffice institution(s)
Faculdade de Ciências da Universidade do Porto, Porto, Portugal; Instituto de Patologia e Imunologia Molecular da Universidade do Porto, Porto, Portugal; Centro de Matemática da Universidade do Porto, Porto, Portugal
mtDNAoffice funding source(s)
Supported by a doctoral grant (SFRH/BD/38171/2007), a post-doctoral grant (SFRH/BPD/43646/2008) from Fundação para a Ciência e Tecnologia, the Portuguese Foundation for Science and Technology (FCT), the European Regional Development Fund through the program COMPETE and by the Portuguese Government through the FCT under the project Pest-C/MAT/UI0144/2011.

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