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MTGD specifications


Unique identifier OMICS_11994
Alternative name Medicago truncatula genome database
Restrictions to use None
Database management system MySQL
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes


  • Plants and Fungi
    • Medicago truncatula


  • person_outline Vivek Krishkumar

Publication for Medicago truncatula genome database

MTGD citations


Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado

PMCID: 4795932
PMID: 26989146
DOI: 10.1093/database/baw010

[…] databases. Some examples of genome databases that use Chado include the Hardwood Genomics Project ( (), the Banana Genome Hub ( (), the Medicago truncatula genome database ( (), the i5k Workspace ( () and the Arabidopsis Information Portal (’The g […]


Differential phylogenetic expansions in BAHD acyltransferases across five angiosperm taxa and evidence of divergent expression among Populus paralogues

BMC Genomics
PMCID: 3123328
PMID: 21569431
DOI: 10.1186/1471-2164-12-236

[…] d no expression support for any of these suspected pseudogenes.Similar BLASTP searches were conducted against the Arabidopsis TAIR9 database [], the Rice Genome Annotation Database release 5 [,], the Medicago truncatula genome database MtDB v2.0 [], and the Vitis vinifera genome database (8X) at Genoscope []. The sequences were aligned for motif inspection as described above, yielding 55 putative […]


Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean

BMC Plant Biol
PMCID: 2848761
PMID: 20199683
DOI: 10.1186/1471-2229-10-41

[…] by BLASTX and TBLASTX at an E-value cutoff of 10-4. The UniProt protein database [], the Pfam protein database [], the Arabidopsis thaliana genome database (TAIR,, and the Medicago truncatula genome database were used for annotation purposes. TAIR gene ontology (GO) and GO slim annotations [] were provided for each Arabidopsis match. BLASTP resul […]


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MTGD institution(s)
Plant Genomics Group, J Craig Venter Institute, Chinakville, MD, USA
MTGD funding source(s)
This work was supported by the National Science Foundation (NSF) [Division of Integrative Organismal Systems award IOS- 0821966].

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