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Multi-locus sequence typing databases | Genome annotation

Based on the premise that similar isolates may share similar medical trait, a prima facie concern shared by the global medical community is: ‘Have we seen the particular pathogen before? Where, when and what kind of disease is it associated…
BacWGSTdb
Dataset

BacWGSTdb

A bacterial whole genome sequence typing database which is designed for…

A bacterial whole genome sequence typing database which is designed for clinicians, clinical microbiologists and hospital epidemiologists. BacWGSTdb borrows the population structure from the current…

Kudoa…
Dataset

Kudoa septempunctata MLST Databases

A genotype database of Kudoa septempunctata. We have developed an intraspecific…

A genotype database of Kudoa septempunctata. We have developed an intraspecific genotyping method, using the sequence variation of mitochondrial genes. We collected olive flounder samples from…

MLST.net
Dataset

MLST.net Multi Locus Sequence Typing Network

A nucleotide sequence based approach for the unambiguous characterisation of…

A nucleotide sequence based approach for the unambiguous characterisation of isolates of bacteria and other organisms via the internet. The aim of MLST is to provide a portable, accurate, and highly…

HyperCAT
Dataset

HyperCAT

Provides access to three typing databases about the Bacillus cereus. HyperCAT…

Provides access to three typing databases about the Bacillus cereus. HyperCAT incorporates analysis tools combining genotyping data from multiple MultiLocus Sequence Typing (MLST) schemes, as…

NGMASTER
Desktop

NGMASTER

Performs in silico NG-MAST on assembled genome data. NGMASTER can determinate…

Performs in silico NG-MAST on assembled genome data. NGMASTER can determinate the multiantigen sequence typing of Neisseria gonorrhoeae (NG-MAST) of 630 assembled genomes. It permits to facilitate…

AgdbNet
Dataset

AgdbNet Antigen sequence database

An antigen sequence database software for web-based bacterial typing. AgdbNet…

An antigen sequence database software for web-based bacterial typing. AgdbNet facilitates simultaneous BLAST querying of multiple loci using either nucleotide or peptide sequences. The software is…

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