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Number of citations per year for the bioinformatics software tool MultiMiTar
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MultiMiTar specifications

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Unique identifier OMICS_06683
Name MultiMiTar
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Information


Unique identifier OMICS_06683
Name MultiMiTar
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for MultiMiTar

MultiMiTar citations

 (4)
library_books

The miR 125 family is an important regulator of the expression and maintenance of maternal effect genes during preimplantational embryo development

2016
Open Biol
PMCID: 5133438
PMID: 27906131
DOI: 10.1098/rsob.160181

[…] umerous computational approaches for miRNA target prediction have already been developed, such as TargetScan, miRanda, miRmap, Diana-MicroT, TargetBoost, miTarget, MirTarget2, TargetSpy, TargetMiner, MultiMiTar, NBmiRTar and microT-ANN []. Because each algorithm has its own set of limitations, multiple computational algorithms are commonly used simultaneously to predict and identify miRNA targets […]

library_books

Improving miRNA mRNA interaction predictions

2014
BMC Genomics
PMCID: 4304206
PMID: 25559987
DOI: 10.1186/1471-2164-15-S10-S2

[…] ance, RNAhybrid[] and miRiam[], first maximize the thermodynamic stability of the miRNA-mRNA pair and then search for sequence complementarities.Machine learning algorithms, such as RFMirTarget[] and MultiMiTar[], filter predictions from ab initio algorithms by using classifiers trained with feature patterns extracted from experimentally-validated interactions. RFMirtarget is based on a random for […]

library_books

A Tri Component Conservation Strategy Reveals Highly Confident MicroRNA mRNA Interactions and Evolution of MicroRNA Regulatory Networks

2014
PLoS One
PMCID: 4108425
PMID: 25054916
DOI: 10.1371/journal.pone.0103142

[…] nd miRNA binding sites in the 3′ UTR to predict highly conserved and confident miRNA-mRNA interactions (). This strategy was applied to three target prediction algorithms (TargetScan –, miRanda , and MultiMiTar ) and three combination datasets (intersection, union, and IntSec(hsa)) across eight species (see Methods). Notably, the third combination dataset, IntSec(hsa), combines the intersection of […]

library_books

miR 1207 5p and miR 1266 suppress gastric cancer growth and invasion by targeting telomerase reverse transcriptase

2014
PMCID: 4040688
PMID: 24481448
DOI: 10.1038/cddis.2013.553

[…] their roles in C3-glomerulopathy. In this study, miRNA interactions were predicted using only the TargetScan website; however, as more bioinformatic tools emerge, such as MicroCosm, Microrna, RNA22, MultiMiTar, and PmirP, other potential hTERT-regulating miRNAs may be discovered.In addition, the other three miRNAs we identified that downregulated hTERT expression (miR-138, miR-491-5p and miR-1182 […]


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MultiMiTar institution(s)
Machine Intelligence Unit, Indian Statistical Institute, Kolkata, West Bengal, India

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