MGR specifications

Information


Unique identifier OMICS_21807
Name Multiple Genome Rearrangements
Alternative name webMGR
Software type Application/Script
Interface Command line interface
Restrictions to use None
Output data A phylogenic tree and a representation.
Output format Newick,ASCII
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Version 2.01
Stability Stable
Source code URL http://grimm.ucsd.edu/DIST/MGR-2.01.tar.gz
Maintained Yes

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Information


Unique identifier OMICS_21807
Name Multiple Genome Rearrangements
Alternative name webMGR
Interface Web user interface
Restrictions to use None
Input data A uni- or multi-chromosomal genome.
Output data A representation of the unrooted tree recovered with clickable edges to display the possible optimal rearrangement events via the GRIMM web server, a pairwise distance matrix of the input genome and offers clickable pairwise scenarios and a signed permutation of the input genome as well as the ancestors recovered.
Output format ASCII
Computer skills Basic
Maintained Yes

Maintainer


This tool is not available anymore.

MGR articles

MGR institution(s)
Department of Mathematics, University of Southern California, CA, USA; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA
MGR funding source(s)
Supported by grants from the National Sciences and Engineering Research Council of Canada.

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